Co-expression analysis

Gene ID Os01g0880200
Gene name
Homology with ArabidopsisSimilar to At1g77130: PGSIP2 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2) (HF=1e-13)
Module size 18 genes
NF 0.18
%ile 16.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8596.10.88Os01g0880200AK100345.1-Glycosyl transferase, family 8 protein1e-13At1g77130PGSIP2 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2)O.I.H.G.S.X.
0.4152.40.92Os05g0408300AK071584.1-Conserved hypothetical protein2e-4At1g10740unknown proteinO.I.H.G.S.X.
0.3948.30.94Os10g0544900AK119635.1-Protein phosphatase 2C-like protein5e-18At5g66080protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.2625.60.94Os05g0585500AK070346.1-Calcium-dependent protein kinase1e-12At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)O.I.H.G.S.X.
0.2524.10.89Os01g0513400AK069619.1-Protein of unknown function DUF789 family protein1e-3At4g16100unknown proteinO.I.H.G.S.X.
0.2219.40.91Os04g0608900AK111698.1-Serine/threonine/tyrosine kinase3e-10At4g31170protein kinase family proteinO.I.H.G.S.X.
0.2117.90.94Os08g0459600AK071203.1-12-oxophytodienoate reductase 3 (EC 1.3.1.42)2e-7At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.H.G.S.X.
0.2016.50.95Os02g0827200AB091673.1-Sucrose transporter1e-18At2g02860SUT2 (SUCROSE TRANSPORTER 2)O.I.H.G.S.X.
0.1813.70.95Os01g0510100CB656690-MAP kinase kinase 15e-30At5g56580MKK6 (MAP KINASE KINASE 6)O.I.H.G.S.X.
0.1712.60.95Os03g0322800AK101817.1-Engulfment and cell motility, ELM domaincontaining protein1e-2At1g03620phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.1712.60.94Os04g0485800AK100299.1-Cyclin-like F-box domain containing protein4e-1At5g14690unknown proteinO.I.H.G.S.X.
0.1611.30.95Os02g0797600AK120644.1-Conserved hypothetical protein8e-5At2g15270unknown proteinO.I.H.G.S.X.
0.1510.30.95Os11g0604600AK102376.1-Conserved hypothetical protein1e-27At2g22120protein binding / zinc ion bindingO.I.H.G.S.X.
0.149.30.96Os02g0810400AK111554.1-Dual specificity kinase 14e-68At3g23340ckl10 (Casein Kinase I-like 10)O.I.H.G.S.X.
0.105.70.94Os08g0157900AK065294.1-No apical meristem (NAM) protein domain containingprotein6e-6At5g18270ANAC087O.I.H.G.S.X.
0.094.90.94Os01g0248400AK072762.1-NADP-dependent isocitrate dehydrogenase2e-38At1g54340ICDH (ISOCITRATE DEHYDROGENASE)O.I.H.G.S.X.
0.084.20.94Os02g0594100AK067412.1-Protein kinase ATN15e-33At5g50180protein kinase, putativeO.I.H.G.S.X.
0.031.40.93Os01g0831200AK070208.1-Ubiquitin domain containing protein4e-2At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.798.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.597.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM302916endo6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1001GO:0015770The directed movement of sucrose into, out of, within or between cells. Sucrose is the disaccharide fructofuranosyl-glucopyranoside.Link to AmiGO
0.0801GO:0044262The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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