Co-expression analysis

Gene ID Os01g0871600
Gene name
Homology with ArabidopsisSimilar to At5g07730: unknown protein (HF=2e-1)
Module size 10 genes
NF 0.49
%ile 63.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.10.75Os01g0871600AK103248.1-TGF-beta receptor, type I/II extracellular regionfamily protein2e-1At5g07730unknown proteinO.I.H.G.S.X.
0.6382.70.83Os11g0134900AK069533.1-Major facilitator superfamily antiporter1e+0At3g43790ZIFL2 (ZINC INDUCED FACILITATOR-like 2)O.I.H.G.S.X.
0.5068.00.87Os03g0237100AK073738.1-Aldo/keto reductase family protein2e-1At1g11690unknown proteinO.I.H.G.S.X.
0.4660.90.82Os12g0282000AK103636.1-Hypothetical protein8e+0At5g63634unknown proteinO.I.H.G.S.X.
0.4458.10.70Os07g0258400AK103557.1-Metal transporter Nramp6 (AtNramp6)2e-8At1g80830NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)O.I.H.G.S.X.
0.4355.40.89Os03g0307200AB023818.1-Nicotianamine synthase 1 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 1) (HvNAS1)7e-1At5g49170unknown proteinO.I.H.G.S.X.
0.3948.30.72Os03g0379300AK068704.1--1e-1At4g26940galactosyltransferase family proteinO.I.H.G.S.X.
0.3846.90.88Os03g0307300AB021746.2-Nicotianamine synthase 1 (EC 2.5.1.43)(S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-methionine 3-amino-3-carboxypropyltransferase 1) (HvNAS1)7e-1At1g03210phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.3236.30.90Os11g0484000AK065321.1-Class II aldolase/adducin, N-terminal familyprotein3e-13At5g53850haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2219.40.90Os02g0714600AK103643.1-Phosphoribosyl pyrophosphate synthase isozyme 4(EC 2.7.6.1)1e-11At2g42910ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.797.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.796.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.095.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2863GO:0006826The directed movement of iron (Fe) ions into, out of, within or between cells.Link to AmiGO
0.1541GO:0009165The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).Link to AmiGO
0.1431GO:0018346The covalent attachment of a prenyl moiety to a protein amino acid.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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