Co-expression analysis

Gene ID Os01g0860500
Gene name
Homology with ArabidopsisSimilar to At5g24090: acidic endochitinase (CHIB1) (HF=4e-2)
Module size 12 genes
NF 0.12
%ile 9.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.80Os01g0860500AB003195.1-Chitinase (EC 3.2.1.14)4e-2At5g24090acidic endochitinase (CHIB1)O.I.H.G.S.X.
0.2931.10.90Os03g0132200AK099870.1-Expansin-like protein A2e-3At3g01300protein kinase, putativeO.I.H.G.S.X.
0.2727.50.90Os03g0764600AK105625.1--4e-9At1g68670myb family transcription factorO.I.H.G.S.X.
0.2625.60.92Os03g0203200AK070827.1-Esterase/lipase/thioesterase domain containingprotein1e-2At3g03990esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.2524.10.91Os08g0453200AK067942.1-Conserved hypothetical protein2e+0At2g19980allergen V5/Tpx-1-related family proteinO.I.H.G.S.X.
0.1510.30.86Os04g0648900AK061095.1-Dehydration responsive element binding protein 2F(DREB2F protein)3e-9At5g67190AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.149.30.88Os02g0670900AK100650.1-Amino acid transporter protein-like2e-52At1g20090ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)O.I.H.G.S.X.
0.116.50.87Os01g0908200AK067269.1-BTB/POZ domain containing protein2e-1At3g43574unknown proteinO.I.H.G.S.X.
0.105.70.83Os07g0584100AK072014.1-MAP kinase-like protein3e-18At5g55560protein kinase family proteinO.I.H.G.S.X.
0.084.20.83Os01g0541800AK066226.1-MtN3 and saliva related transmembrane proteinfamily protein3e+0At5g23660MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)O.I.H.G.S.X.
0.073.70.88Os09g0553300AK109549.1-NUDIX hydrolase domain containing protein7e-4At2g42070ATNUDX23 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23)O.I.H.G.S.X.
0.042.00.86Os08g0526400AK120803.1-Nitrate-induced NOI family protein4e-2At5g09850transcription elongation factor-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.997.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0371GO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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