Co-expression analysis

Gene ID Os01g0827300
Gene name
Homology with ArabidopsisSimilar to At2g30210: LAC3 (laccase 3) (HF=7e-5)
Module size 6 genes
NF 0.84
%ile 98.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.92Os01g0827300AK071929.1-Laccase precursor (EC 1.10.3.2)7e-5At2g30210LAC3 (laccase 3)O.I.H.G.S.X.
0.8395.80.92Os05g0245300AB091471.1-Protein of unknown function DUF588 family protein7e+0Atcg00790-O.I.H.G.S.X.
0.7793.10.90Os06g0274800NM_185795.1-Peroxidase 11 precursor (EC 1.11.1.7) (AtperoxP11) (ATP23a/ATP23b)5e-4At1g68850peroxidase, putativeO.I.H.G.S.X.
0.7793.10.91Os07g0599700AK065663.1-Surface protein PspC6e+0At5g09480hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6787.20.92Os07g0599900CF291190-Conserved hypothetical protein1e-1At5g09530hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6787.20.93Os08g0478000AK059493.1-Conserved hypothetical protein4e-1At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.198.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.397.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.197.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0009826The process by which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.Link to AmiGO
0.2001GO:0009741A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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