Co-expression analysis

Gene ID Os01g0821600
Gene name
Homology with ArabidopsisSimilar to At4g09460: ATMYB6 (HF=2e-1)
Module size 9 genes
NF 0.49
%ile 63.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.40.83Os01g0821600AK108657.1-DNA-binding WRKY domain containing protein2e-1At4g09460ATMYB6O.I.H.G.S.X.
0.8295.00.82Os09g0457900AK067195.1-AP2 domain containing protein RAP2.6 (Fragment)5e-1At3g23230ethylene-responsive factor, putativeO.I.H.G.S.X.
0.6079.70.83Os09g0522000AY166833.1-CBF-like protein5e-1At5g14360ubiquitin family proteinO.I.H.G.S.X.
0.5777.00.86Os03g0315400BI807304-MYB-related protein 3404e+0At5g27247unknown proteinO.I.H.G.S.X.
0.5573.70.83Os05g05528009633.m04468-Conserved hypothetical protein4e+0At5g44060unknown proteinO.I.H.G.S.X.
0.3846.90.88Os04g0684900D64039.1-Ribonuclease CAF1 family protein3e+0At5g37780CAM1 (CALMODULIN 1)O.I.H.G.S.X.
0.3846.90.88Os03g02921009631.m01785-Protein phosphatase 2C family protein8e-1At4g08260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3745.00.88Os07g0680600AK059307.1-Conserved hypothetical protein5e+0At5g18200UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferaseO.I.H.G.S.X.
0.2422.40.83Os10g0521900AK061038.1-Rhomboid-like protein family protein1e-8At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.198.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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