CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0818100

Gene name
Homology with Arabidopsis Similar to At5g01990: auxin efflux carrier family protein (HF=2e-8)

Module size 7 genes

NF 0.40

%ile 47.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.57 77.0 0.98 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein O.I. H.G. S.X.
0.61 81.2 0.98 Os10g0572000 NM_197842.1 - GTP-binding protein, HSR1-related domaincontaining protein 6e-1 At5g64460 - O.I. H.G. S.X.
0.46 60.9 0.98 Os02g0456000 AK119496.1 - - 4e-6 At4g01400 - O.I. H.G. S.X.
0.37 45.0 0.98 Os09g0546400 AK072378.1 - - 1e+0 At2g41225 unknown protein O.I. H.G. S.X.
0.33 38.8 0.98 Os02g0159400 AK109550.1 - Hypothetical protein 8e-2 At3g46666 unknown protein O.I. H.G. S.X.
0.32 36.3 0.98 Os12g0626000 AK109499.1 - Hypothetical protein 9e-3 At3g13570 SCL30a O.I. H.G. S.X.
0.24 22.4 0.98 Os11g0106800 9639.m00055 - Hypothetical protein 3e-1 At3g06780 glycine-rich protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
63.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.2 99.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.3 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.8 98.6 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.9 98.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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