Co-expression analysis

Gene ID Os01g0803200
Gene name
Homology with ArabidopsisSimilar to At2g40880: ATCYSA (CYSTATIN A) (HF=1e+0)
Module size 6 genes
NF 0.31
%ile 33.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.93Os01g0803200AK121632.1-Cysteine proteinase inhibitor-I (Oryzacystatin-I)1e+0At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.5068.00.93Os11g0186200BI806335-Aldehyde dehydrogenase (EC 1.2.1.3)1e+0At1g01520myb family transcription factorO.I.H.G.S.X.
0.4051.10.95Os09g0442300CB666183-Oryzain gamma chain precursor (EC 3.4.22.-)4e-30At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.3541.70.93Os06g0270900AF162665.1-RF2 (EC 1.2.1.3) (T cytoplasm male sterilityrestorer factor 2)1e-53At1g23800ALDH2B7O.I.H.G.S.X.
0.3134.50.93Os02g0817700AY224469.1-Acetyl-CoA acyltransferase (3-ketoacyl-coathiolase) (EC 2.3.1.16)5e-9At1g04710PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4)O.I.H.G.S.X.
0.149.30.93Os05g0310500AK101093.1-Cathepsin B (Fragment)1e-33At1g02300cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.799.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.398.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.998.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1606758_at, orthologous to the query gene, Os01g0803200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5679.41606758_atAt2g40880--1e+0At4g35210unknown proteinO.I.H.G.S.X.
0.6384.31617930_atAt2g40880hypothetical protein LOC100260270-4e-3At2g28140unknown proteinO.I.H.G.S.X.
0.6384.31610108_atAt2g40880--1e+0At4g31730GDU1 (GLUTAMINE DUMPER 1)O.I.H.G.S.X.
0.5980.61614047_s_atAt2g40880hypothetical protein LOC100268134-1e-1At1g31300-O.I.H.G.S.X.
0.5475.71620050_atAt2g40880hypothetical protein LOC100244027-1e-5At5g17500glycosyl hydrolase family 5 protein / cellulase family proteinO.I.H.G.S.X.
0.5173.21609591_atAt2g40880hypothetical protein LOC100241753-1e-3At3g61900auxin-responsive family proteinO.I.H.G.S.X.
0.5173.21615374_atAt2g40880hypothetical protein LOC100241955-8e-1At1g34000OHP2 (ONE-HELIX PROTEIN 2)O.I.H.G.S.X.
0.5072.71607492_atAt2g40880ripening-related protein-like-4e-1At3g63420AGG1 (Arabidopsis Ggamma-subunit 1)O.I.H.G.S.X.
0.5072.71616147_atAt2g40880hypothetical protein LOC100243192-2e-6At2g26800hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putativeO.I.H.G.S.X.
0.4868.81616116_atAt2g40880hypothetical protein LOC100268134-2e-21At5g20250DIN10 (DARK INDUCIBLE 10)O.I.H.G.S.X.
0.4361.51620347_atAt2g40880hypothetical protein LOC100245312-1e-13At3g10320transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.4260.11606482_atAt2g40880hypothetical protein LOC100243077-3e-10At3g44830lecithin:cholesterol acyltransferase family protein / LACT family proteinO.I.H.G.S.X.
0.3243.11609861_atAt2g40880hypothetical protein LOC100246739-6e+0At5g02640unknown proteinO.I.H.G.S.X.
0.3141.31616279_atAt2g40880hypothetical protein LOC100260173-1e-1At1g70440SRO3 (SIMILAR TO RCD ONE 3)O.I.H.G.S.X.
0.2837.71608637_atAt2g40880hypothetical protein LOC100246087-4e+0At2g35080ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingO.I.H.G.S.X.
0.2225.61619862_atAt2g40880hypothetical protein LOC100251016-3e-1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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