Co-expression analysis

Gene ID Os01g0803200
Gene name
Homology with ArabidopsisSimilar to At2g40880: ATCYSA (CYSTATIN A) (HF=1e+0)
Module size 6 genes
NF 0.31
%ile 33.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.93Os01g0803200AK121632.1-Cysteine proteinase inhibitor-I (Oryzacystatin-I)1e+0At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.5068.00.93Os11g0186200BI806335-Aldehyde dehydrogenase (EC 1.2.1.3)1e+0At1g01520myb family transcription factorO.I.H.G.S.X.
0.4051.10.95Os09g0442300CB666183-Oryzain gamma chain precursor (EC 3.4.22.-)4e-30At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.3541.70.93Os06g0270900AF162665.1-RF2 (EC 1.2.1.3) (T cytoplasm male sterilityrestorer factor 2)1e-53At1g23800ALDH2B7O.I.H.G.S.X.
0.3134.50.93Os02g0817700AY224469.1-Acetyl-CoA acyltransferase (3-ketoacyl-coathiolase) (EC 2.3.1.16)5e-9At1g04710PKT4 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 4)O.I.H.G.S.X.
0.149.30.93Os05g0310500AK101093.1-Cathepsin B (Fragment)1e-33At1g02300cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.799.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.398.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.998.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.208899.1.S1_at, orthologous to the query gene, Os01g0803200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8096.0PtpAffx.208899.1.S1_atAt2g40880hypothetical protein-7e-8At5g62460zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5582.2PtpAffx.14077.1.S1_atAt2g40880hypothetical protein-2e+0At5g21020-O.I.H.G.S.X.
0.4067.0PtpAffx.222953.1.S1_atAt2g40880hypothetical protein-3e-3At5g51460ATTPPAO.I.H.G.S.X.
0.3863.7PtpAffx.4645.1.S1_atAt2g40880hypothetical protein-4e-5At3g14770nodulin MtN3 family proteinO.I.H.G.S.X.
0.2543.6Ptp.3145.1.S1_s_atAt2g40880hypothetical protein-2e-3At3g10985SAG20 (SENESCENCE ASSOCIATED GENE 20)O.I.H.G.S.X.
0.1423.5PtpAffx.211137.1.S1_atAt2g40880hypothetical protein-5e-8At3g03540NPC5 (NON-SPECIFIC PHOSPHOLIPASE C5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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