Co-expression analysis

Gene ID Os01g0802200
Gene name
Homology with ArabidopsisSimilar to At3g29250: copper ion binding / oxidoreductase (HF=2e+0)
Module size 7 genes
NF 0.17
%ile 14.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.85Os01g0802200AK062699.1-Conserved hypothetical protein2e+0At3g29250copper ion binding / oxidoreductaseO.I.H.G.S.X.
0.4660.90.91Os01g0739200AK073172.1-Dual specificity protein phosphatase familyprotein3e-3At3g16350myb family transcription factorO.I.H.G.S.X.
0.3846.90.88Os04g0483200AK069389.1-Conserved hypothetical protein1e+0At5g04890RTM2 (RESTRICTED TEV MOVEMENT 2)O.I.H.G.S.X.
0.149.30.91Os06g0717100AK071437.1-Senescence-associated family protein9e-4At3g51250senescence/dehydration-associated protein-relatedO.I.H.G.S.X.
0.127.20.89Os09g0135800AK108591.1-ARM repeat fold domain containing protein1e-1At2g05810armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.
0.105.70.88Os04g0602300AK105720.1-Conserved hypothetical protein4e+0At5g59230transcription factor-relatedO.I.H.G.S.X.
0.063.00.88Os02g0685900C22384-Calcium dependent protein kinase1e-16At4g38230CPK26O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.197.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0381GO:0006470The process of removing one or more phosphoric residues from a protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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