CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0791066

Gene name
Homology with Arabidopsis Similar to Atmg01330: - (HF=3e-78)

Module size 6 genes

NF 0.77

%ile 97.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.91 98.9 0.99 Os01g0791066 9629.m05686 - - 3e-78 Atmg01330 - O.I. H.G. S.X.
0.83 95.8 0.99 Os12g0424300 9640.m02245 - - 6e-1 At5g07840 ankyrin repeat family protein O.I. H.G. S.X.
0.77 93.1 0.99 Os09g0263832 BA000029.2 - - 1e-117 Atmg00210 - O.I. H.G. S.X.
0.67 87.2 0.99 Os12g0523900 BA000029.2 - - 2e-26 Atmg00516 - O.I. H.G. S.X.
0.61 81.2 0.99 Os12g0252401 9640.m03901 - - 7e-21 Atmg00513 - O.I. H.G. S.X.
0.46 60.9 0.99 Os07g0482800 AK062324.1 - - 7e-15 At2g07775 unknown protein O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.8 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
34.5 99.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
34.1 99.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.1 99.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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