Co-expression analysis

Gene ID Os01g0789400
Gene name
Homology with ArabidopsisSimilar to Atcg00740: - (HF=2e-50)
Module size 6 genes
NF 0.69
%ile 92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.91Os01g0789400NM_195997.1-Alpha subunit of RNA polymerase2e-50Atcg00740-O.I.H.G.S.X.
0.8094.60.93Os10g0356366CR288737--3e-30Atcg00510-O.I.H.G.S.X.
0.6787.20.95Os10g0527100BI795990-Chloroplast ATP synthase a chain precursor (EC3.6.3.14) (ATPase subunit IV)2e+0At5g15850COL1 (constans-like 1)O.I.H.G.S.X.
0.5068.00.91Os05g0292600AK071967.1-Chloroplast 50S ribosomal protein L145e-68Atcg00780-O.I.H.G.S.X.
0.4660.90.93Os01g0792400AK062797.1-Photosystem I assembly protein ycf42e-53Atcg00520-O.I.H.G.S.X.
0.4458.10.96Os04g0235600CR291556-ATP synthase B chain (EC 3.6.3.14) (Subunit I)2e-42Atcg00130-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.399.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
32.799.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.099.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.398.9GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0871GO:0006818The directed movement of hydrogen (H2 or H+), into, out of, within or between cells.Link to AmiGO
0.0631GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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