Co-expression analysis

Gene ID Os01g0787600
Gene name
Homology with ArabidopsisSimilar to At5g05830: zinc finger (C3HC4-type RING finger) family protein (HF=2e+0)
Module size 6 genes
NF 0.39
%ile 46.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.88Os01g0787600AK121948.1-Ethylene-induced esterase2e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6787.20.86Os02g0582600AK102380.1-Heavy metal transport/detoxification proteindomain containing protein6e-1At1g49715-O.I.H.G.S.X.
0.6787.20.88Os02g0562600AK121163.1-Mlo-related protein family protein1e-4At4g02600MLO1O.I.H.G.S.X.
0.5777.00.89Os01g0916000AK106300.1-Conserved hypothetical protein1e-2At5g02560HTA12O.I.H.G.S.X.
0.5371.30.87Os01g0916100CB645166-Conserved hypothetical protein4e-2At1g67570unknown proteinO.I.H.G.S.X.
0.084.20.88Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.498.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.497.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM431926Root- +Fe+P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.496.8GSM431925Root- +Fe+P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.496.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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