Co-expression analysis

Gene ID Os01g0775600
Gene name
Homology with ArabidopsisSimilar to At1g06060: RanBPM-related (HF=6e-1)
Module size 6 genes
NF 0.33
%ile 36.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.97Os01g0775600AK122081.1-Lissencephaly type-1-like homology motif domaincontaining protein6e-1At1g06060RanBPM-relatedO.I.H.G.S.X.
0.4051.10.97Os07g0546100AK100024.1-Conserved hypothetical protein2e-2At1g11480eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.3846.90.97Os01g0920400AK073965.1-Dynamin family protein1e-13At4g33650DRP3A (DYNAMIN-RELATED PROTEIN 3A)O.I.H.G.S.X.
0.3541.70.97Os08g0427300AK066491.1-Conserved hypothetical protein3e-7At1g16020unknown proteinO.I.H.G.S.X.
0.2321.20.97Os10g0470900AK059172.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-1At4g31430unknown proteinO.I.H.G.S.X.
0.138.20.97Os05g0371200AK109403.2-26S proteasome non-ATPase regulatory subunit 14(26S proteasome regulatory subunit rpn11)6e-41At5g2354026S proteasome regulatory subunit, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.998.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0571GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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