Co-expression analysis

Gene ID Os01g0749200
Gene name
Homology with ArabidopsisSimilar to At1g78630: emb1473 (embryo defective 1473) (HF=1e-20)
Module size 6 genes
NF 0.72
%ile 94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os01g0749200AK104146.1-50S ribosomal protein L131e-20At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.7391.10.98Os02g0259600AK062182.1-50S ribosomal protein L21, chloroplast precursor(CL21) (CS-L7)2e-3At1g3568050S ribosomal protein L21, chloroplast / CL21 (RPL21)O.I.H.G.S.X.
0.7391.10.98Os02g0822600AK060728.1-50S ribosomal protein L9, chloroplast precursor(CL13)2e+0At3g44890RPL9 (RIBOSOMAL PROTEIN L9)O.I.H.G.S.X.
0.6787.20.98Os01g0278900AK120429.1-Hypothetical protein3e-7At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)O.I.H.G.S.X.
0.6079.70.99Os01g0678600AK120629.1-Ribosomal protein S20 family protein1e-1At4g30460glycine-rich proteinO.I.H.G.S.X.
0.4051.10.98Os03g0704000CR281175-30S ribosomal protein S13, chloroplast precursor(CS13)1e-1At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1613645_at, orthologous to the query gene, Os01g0749200

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.81613645_atAt1g78630hypothetical protein LOC100248623-7e-55At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.8093.61622813_a_atAt1g78630hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.6787.91611595_s_atAt1g78630hypothetical protein LOC100245386-4e-11At1g62780unknown proteinO.I.H.G.S.X.
0.6081.91622348_s_atAt1g78630hypothetical protein LOC100248623-1e-34At1g78630emb1473 (embryo defective 1473)O.I.H.G.S.X.
0.5375.21614317_atAt1g78630hypothetical protein LOC100245459-2e-2At4g37230oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putativeO.I.H.G.S.X.
0.2327.51615609_atAt1g78630hypothetical protein LOC100268043-1e-11At3g25920RPL15O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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