Co-expression analysis

Gene ID Os01g0730300
Gene name
Homology with ArabidopsisSimilar to At1g70290: ATTPS8 (HF=2e-15)
Module size 20 genes
NF 0.20
%ile 17.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.92Os01g0730300AK109542.1-Glycosyl transferase, family 20 domain containingprotein2e-15At1g70290ATTPS8O.I.H.G.S.X.
0.3846.90.95Os01g0796700AK120491.1--4e-6At1g03770RING1B (RING 1B)O.I.H.G.S.X.
0.3134.50.95Os01g0977600AK060263.1-Zn-finger, RING domain containing protein4e+0At5g38720unknown proteinO.I.H.G.S.X.
0.2931.10.94Os12g0580500AK106472.1-Hypothetical protein9e-1At1g72580unknown proteinO.I.H.G.S.X.
0.2831.10.96Os04g0448200AK060713.1-Conserved hypothetical protein7e-1At1g23560unknown proteinO.I.H.G.S.X.
0.2321.20.96Os02g0147800AK106225.1-Homeo protein (Fragment)3e-1At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.2219.40.95Os03g0777700AK120460.1-FAR1 domain containing protein2e-1At5g38720unknown proteinO.I.H.G.S.X.
0.2117.90.94Os09g0407900AK070971.1-Peptidase C19, ubiquitin carboxyl-terminalhydrolase 2 family protein2e-33At4g22285ubiquitin thiolesterase/ zinc ion bindingO.I.H.G.S.X.
0.2117.90.96Os01g0246100AK120732.1-Protein of unknown function DUF902 domaincontaining protein2e-3At1g79000HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1)O.I.H.G.S.X.
0.2117.90.94Os06g0343100AK100422.1-ATP-dependent helicase DHX8 (RNA helicase HRH1)(DEAH-box protein 8)1e-29At3g26560ATP-dependent RNA helicase, putativeO.I.H.G.S.X.
0.1813.70.95Os01g0967100AK120690.1-Conserved hypothetical protein5e-1At3g25850DC1 domain-containing proteinO.I.H.G.S.X.
0.1712.60.96Os01g0846900AK101755.1-Transcription initiation factor TFIID domaincontaining protein3e-4At1g17440EER4 (ENHANCED ETHYLENE RESPONSE 4)O.I.H.G.S.X.
0.1712.60.97Os01g0148000CB642477-Zn-finger (putative), N-recognin domain containingprotein3e-12At5g02310PRT6 (PROTEOLYSIS 6)O.I.H.G.S.X.
0.1712.60.95Os12g0618300AK103368.1-GTP-binding protein-like (Fragment)1e-37At2g27200GTP-binding family proteinO.I.H.G.S.X.
0.1611.30.96Os06g0622300AK064549.1-AT-rich interaction region domain containingprotein3e-3At1g76510ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.1510.30.95Os03g03062009631.m01910-Cytochrome cd1-nitrite reductase-like, C-terminalhaem d1 domain containing protein3e-49At5g49430transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.138.20.95Os02g0290300AK068360.1-Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein4e-10At1g04140transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.138.20.95Os12g0137500Z54153.1-PP2A regulatory subunit-like protein2e-1At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.138.20.96Os03g0210800BQ908513-DNA polymerase, beta-like region domain containingprotein6e+0At5g60190Ulp1 protease family proteinO.I.H.G.S.X.
0.116.50.95Os04g0672200AK099725.1-Conserved hypothetical protein2e-3At2g01340unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.799.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.398.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0951GO:0006471The transfer, from NAD, of ADP-ribose to protein amino acids.Link to AmiGO
0.0951GO:0009607A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.Link to AmiGO
0.0951GO:0009966Any process that modulates the frequency, rate or extent of signal transduction.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage