Co-expression analysis

Gene ID Os01g0704200
Gene name
Homology with ArabidopsisSimilar to At5g63040: unknown protein (HF=9e-12)
Module size 6 genes
NF 0.42
%ile 52.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.94Os01g07042009629.m04922-Conserved hypothetical protein9e-12At5g63040unknown proteinO.I.H.G.S.X.
0.6181.20.94Os11g0490800AK106821.1-ABC transporter related domain containing protein3e-6At5g14100ATNAP14O.I.H.G.S.X.
0.5068.00.94Os03g0174600AK059155.1-contains InterPro domain(s): IPR0045062e-10At1g51310tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferaseO.I.H.G.S.X.
0.5068.00.95Os01g0692600AK100145.1-Conserved hypothetical protein1e-3At1g15060-O.I.H.G.S.X.
0.3032.70.94Os11g0610900AK100567.1-Seryl-tRNA synthetase, class IIa family protein7e-8At1g11870SRS (SERYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.2524.10.94Os03g0686900CB627059-Hypothetical protein8e-1At1g61160-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
59.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.099.2GSM159172Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
18.198.9GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
10.798.1GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
9.597.9GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
7.497.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.496.8GSM262009IAC165, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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