Co-expression analysis

Gene ID Os01g0672800
Gene name
Homology with ArabidopsisSimilar to At5g39950: ATTRX2 (THIOREDOXIN 2) (HF=3e-1)
Module size 6 genes
NF 0.27
%ile 27.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.90Os01g0672800AK101605.1-Protein of unknown function DUF1421 family protein3e-1At5g39950ATTRX2 (THIOREDOXIN 2)O.I.H.G.S.X.
0.4660.90.90Os02g0685900C22384-Calcium dependent protein kinase1e-16At4g38230CPK26O.I.H.G.S.X.
0.3846.90.91Os06g0717100AK071437.1-Senescence-associated family protein9e-4At3g51250senescence/dehydration-associated protein-relatedO.I.H.G.S.X.
0.1813.70.90Os02g0780700AK063558.1-Lipase, class 3 family protein4e-10At3g14075lipase class 3 family proteinO.I.H.G.S.X.
0.1510.30.91Os04g0608900AK111698.1-Serine/threonine/tyrosine kinase3e-10At4g31170protein kinase family proteinO.I.H.G.S.X.
0.1510.30.90Os05g0407500AK074026.1-Esterase/lipase/thioesterase domain containingprotein3e-1At5g11600unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.497.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.397.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.796.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlingsLink to GEO
5.196.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.096.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0441GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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