Co-expression analysis

Gene ID Os01g0667900
Gene name
Homology with ArabidopsisSimilar to At4g38140: zinc finger (C3HC4-type RING finger) family protein (HF=2e+0)
Module size 6 genes
NF 0.59
%ile 80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.91Os01g0667900AK105335.1-Glutaredoxin domain containing protein2e+0At4g38140zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5777.00.92Os09g0486500AF140722.2-Multiple stress-responsive zinc-finger protein(Multiple stress- associated zinc-finger protein)2e+0At5g24290integral membrane family proteinO.I.H.G.S.X.
0.4660.90.92Os07g0685700AB074972.1-Ethylene insensitive 3 family protein2e-2At1g56170NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2)O.I.H.G.S.X.
0.4458.10.93Os04g05435009632.m04421-Homeodomain-like containing protein2e+0At2g44730transcription factorO.I.H.G.S.X.
0.4458.10.94Os05g0497300AK111755.1-Ethylene responsive element binding factor 5(AtERF5)4e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.
0.3644.00.91Os01g0159300AK073728.1-Zn-finger, RING domain containing protein1e+0At3g61370unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.699.2GSM195218stigma 1, biological rep1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
21.599.2GSM195220stigma 3, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
19.799.1GSM195219stigma 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.098.3GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.497.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.296.0GSM159205Inflorescence (P6, 22 - 30 cm), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
4.196.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.095.9GSM159206Inflorescence (P6, 22 - 30 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
3.895.7GSM159191Young inflorescence (P1, upto 3 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
3.695.5GSM278853KT95-418-non-infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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