CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0663050

Gene name
Homology with Arabidopsis Similar to At5g51170: unknown protein (HF=6e+0)

Module size 6 genes

NF 0.58

%ile 78.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.35 41.7 0.98 Os01g0663050 NM_192502.1 - - 6e+0 At5g51170 unknown protein O.I. H.G. S.X.
0.77 93.1 0.98 Os12g0473400 9640.m02775 - - 2e+0 At5g23090 NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13) O.I. H.G. S.X.
0.67 87.2 0.98 Os10g0424100 9638.m02453 - BTB/POZ domain containing protein 7e+0 At3g24506 unknown protein O.I. H.G. S.X.
0.67 87.2 0.98 Os04g0472000 9632.m03753 - - 5e+1 At5g45490 disease resistance protein-related O.I. H.G. S.X.
0.61 81.2 0.98 Os01g0371900 NM_193844.1 - - 1e+1 At3g48570 protein transport protein SEC61 gamma subunit, putative O.I. H.G. S.X.
0.38 46.9 0.98 Os03g0266500 9631.m01552 - - 3e+0 At2g11890 adenylate cyclase O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
82.6 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
45.2 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.9 99.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
16.1 98.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.1 98.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.3 98.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.0 98.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.3 98.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage