Co-expression analysis

Gene ID Os01g0656400
Gene name
Homology with ArabidopsisSimilar to At3g11820: SYP121 (SYNTAXIN OF PLANTS 121) (HF=8e-3)
Module size 7 genes
NF 0.28
%ile 28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.81Os01g06564009629.m04484-WRKY transcription factor 158e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)O.I.H.G.S.X.
0.5573.70.83Os05g0546400AK109087.1-Conserved hypothetical protein1e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.4051.10.84Os01g0864500AK068115.1-Harpin-induced 1 domain containing protein8e+0At5g47080CKB1O.I.H.G.S.X.
0.3338.80.83Os05g0181700AK066089.1-Hypothetical protein3e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.
0.2524.10.86Os08g0384500AK100858.1-PDR-like ABC transporter (PDR3 ABC transporter)2e-33At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)O.I.H.G.S.X.
0.1813.70.83Os04g0586500AK106447.1-Conserved hypothetical protein4e+0At3g51550FER (FERONIA)O.I.H.G.S.X.
0.1611.30.83Os09g0334500AK065265.1--9e-4At4g39410WRKY13O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
74.099.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
36.799.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.698.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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