Co-expression analysis

Gene ID Os01g0655500
Gene name
Homology with ArabidopsisSimilar to At5g53450: ORG1 (OBP3-responsive gene 1) (HF=1e-10)
Module size 6 genes
NF 0.75
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.84Os01g0655500AK120660.1-Protein kinase domain containing protein1e-10At5g53450ORG1 (OBP3-responsive gene 1)O.I.H.G.S.X.
0.7391.10.80Os11g0262600AB053296.1-Hypothetical protein2e+0At3g49120PRXCB (PEROXIDASE CB)O.I.H.G.S.X.
0.7391.10.84Os07g0258400AK103557.1-Metal transporter Nramp6 (AtNramp6)2e-8At1g80830NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)O.I.H.G.S.X.
0.6787.20.87Os03g0379300AK068704.1--1e-1At4g26940galactosyltransferase family proteinO.I.H.G.S.X.
0.6079.70.84Os03g0736900AK068443.1-Conserved hypothetical protein2e+0At5g23100unknown proteinO.I.H.G.S.X.
0.5371.30.84Os01g0689300CF316434-Protein of unknown function HHE domain containingprotein4e-26At3g18290EMB2454 (embryo defective 2454)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.799.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.899.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.498.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0131GO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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