Co-expression analysis

Gene ID Os01g0650100
Gene name
Homology with ArabidopsisSimilar to At2g29530: mitochondrial import inner membrane translocase (TIM10) (HF=1e+0)
Module size 6 genes
NF 0.21
%ile 19.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.85Os01g0650100AK063873.1-Hypothetical protein1e+0At2g29530mitochondrial import inner membrane translocase (TIM10)O.I.H.G.S.X.
0.5068.00.85Os12g0111500AK061388.1-BTB/POZ domain containing protein2e+0At5g26890unknown proteinO.I.H.G.S.X.
0.2931.10.88Os07g02044009635.m01011-Conserved hypothetical protein2e-1At2g40530unknown proteinO.I.H.G.S.X.
0.2727.50.89Os09g0422500AK121170.1-Cellulose synthase3e-33At5g17420IRX3 (IRREGULAR XYLEM 3)O.I.H.G.S.X.
0.2422.40.85Os11g0499600AK106189.1-Short-chain dehydrogenase/reductase SDR familyprotein1e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.073.70.88Os05g0159300AK070904.1-Lipolytic enzyme, G-D-S-L family protein4e-2At1g09390GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.698.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM159263Drought stress, biological rep 2GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
13.198.4GSM159264Drought stress, biological rep 3GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
13.198.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM159262Drought stress, biological rep 1GSE6901Expression data for stress treatment in rice seedlingsLink to GEO
12.598.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.498.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0771GO:0030244The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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