Co-expression analysis

Gene ID	Os01g0627900
Gene name
Homology with Arabidopsis	Similar to At1g17060: CYP72C1 (CYTOCHROME P450 72C1) (HF=9e-4)
Module size	6 genes
NF	0.31
%ile	33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.28	31.1	0.77	Os01g0627900	AB038597.1	-	Cytochrome P450 monooxygenase CYP72A5 (Fragment)	9e-4	At1g17060	CYP72C1 (CYTOCHROME P450 72C1)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	0.76	Os08g0112300	AK070381.1	-	Transferase family protein	8e-1	At3g03920	Gar1 RNA-binding region family protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.33	38.8	0.82	Os04g0209200	AK100406.1	-	Glutathione-conjugate transporter AtMRP4	2e-6	At3g62700	ATMRP10	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.30	32.7	0.78	Os02g0179600	AK110418.1	-	Conserved hypothetical protein	7e-2	At5g43400	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	27.5	0.76	Os09g0444900	AK066356.1	-	-	8e-3	At1g55240	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.25	24.1	0.78	Os07g0416900	AK070559.1	-	Omega-6 fatty acid desaturase, endoplasmicreticulum isozyme 2 (EC 1.14.19.-)	7e-1	At4g20690	unknown protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
54.7	99.9	GSM422676	Control	GSE16865	Heterologous microarrays for the study of drought stress in Musa
37.6	99.8	GSM174886	F FR13 4 dpi rep 1 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
34.8	99.8	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
28.5	99.6	GSM174889	H FR13 4 dpi rep 2 with array type rice from Affymetrix	GSE7256	Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
18.0	98.9	GSM377078	Genomic DNA - 45 day old leaf sample - mutant g6603	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.3	98.7	GSM377076	Genomic DNA - 45 day old leaf sample - mutant g6485	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.2	98.5	GSM422674	Musa_DNA_RICE	GSE16865	Heterologous microarrays for the study of drought stress in Musa
13.7	98.5	GSM377071	Genomic DNA - 45 day old leaf sample - mutant d256	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.0	98.4	GSM377077	Genomic DNA - 45 day old leaf sample - mutant g6489	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.8	98.4	GSM377074	Genomic DNA - 45 day old leaf sample - mutant g282	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO
0.063	1	GO:0015992	The directed movement of protons (hydrogen ions) into, out of, within or between cells.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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