Co-expression analysis

Gene ID Os01g0627600
Gene name
Homology with ArabidopsisSimilar to At3g14630: CYP72A9 (HF=1e-2)
Module size 6 genes
NF 0.65
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.83Os01g0627600AK101667.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)1e-2At3g14630CYP72A9O.I.H.G.S.X.
0.7391.10.86Os08g0156100AK063249.1-Conserved hypothetical protein1e+0At3g23170unknown proteinO.I.H.G.S.X.
0.6787.20.88Os01g0934800Z34270.1-Alpha/beta hydrolase fold domain containingprotein1e-1At2g23580MES4 (METHYL ESTERASE 4)O.I.H.G.S.X.
0.6079.70.84Os06g0507300AK111324.1-GAMYB-binding protein1e-1At3g20180metal ion bindingO.I.H.G.S.X.
0.4660.90.83Os10g0527400D10861.1-Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1)5e-1At2g29450ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)O.I.H.G.S.X.
0.3541.70.80Os01g09499009629.m07137-GST7 protein (EC 2.5.1.18)9e-2At3g09270ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.197.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
6.197.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.897.0GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.496.8GSM240996Zhonghua11 7 DAF, biological replicate 3GSE9498Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stageLink to GEO
5.396.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM159216Seed (S4, 11 - 20 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.296.7GSM359912IR29 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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