Co-expression analysis

Gene ID Os01g0623200
Gene name
Homology with ArabidopsisSimilar to At5g24030: SLAH3 (SLAC1 HOMOLOGUE 3) (HF=8e-11)
Module size 28 genes
NF 0.15
%ile 12.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.77Os01g0623200CB668440-C4-dicarboxylate transporter/malic acid transportprotein family protein8e-11At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)O.I.H.G.S.X.
0.3032.70.81Os04g0640900AK062582.1-Conserved hypothetical protein8e-8At5g64550loricrin-relatedO.I.H.G.S.X.
0.2321.20.91Os02g0690200AK070868.1-Conserved hypothetical protein4e-1At4g31150endonuclease V family proteinO.I.H.G.S.X.
0.2016.50.91Os12g0596800AK065760.1-Ubiquitin interacting motif domain containingprotein1e-12At4g36860zinc ion bindingO.I.H.G.S.X.
0.1915.10.93Os07g0569700AK062388.1-Zn-finger, C2H2 type domain containing protein3e-1At5g09270unknown proteinO.I.H.G.S.X.
0.1915.10.92Os02g0165000AK069562.1-Zn-finger, RING domain containing protein7e-5At3g09760zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1813.70.92Os11g0703400AB117996.1-Snf7 family protein2e-19At2g06530VPS2.1O.I.H.G.S.X.
0.1712.60.89Os02g0118200AK111716.1-Protein kinase8e-4At4g35600CONNEXIN 32O.I.H.G.S.X.
0.1712.60.91Os03g0809100AK070392.1-Major facilitator superfamily protein2e-11At4g36790transporter-relatedO.I.H.G.S.X.
0.1712.60.89Os03g0326000AK059185.1-Phospholipid-transporting ATPase 1 (EC 3.6.3.1)(Aminophospholipid flippase 1)7e+0At3g61678unknown proteinO.I.H.G.S.X.
0.1611.30.92Os03g0843100AK111499.1-Ras-related protein Rab-11B4e-11At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)O.I.H.G.S.X.
0.1611.30.94Os03g0318600AB051294.1-Transcription factor HBP-1b(c38)4e-15At5g06950AHBP-1BO.I.H.G.S.X.
0.1510.30.92Os03g0170400AU057487-Protein kinase APK1B (EC 2.7.1.-)5e-9At2g28930APK1BO.I.H.G.S.X.
0.1510.30.88Os01g0136400AK065470.1-Protein kinase domain containing protein3e-4At1g25390protein kinase family proteinO.I.H.G.S.X.
0.149.30.92Os11g0113300BX898462-Conserved hypothetical protein5e-1At4g20470unknown proteinO.I.H.G.S.X.
0.149.30.89Os06g02833009634.m01742-Serine/threonine protein kinase family protein1e-4At5g15730serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.138.20.87Os05g0163700AK071561.1-Acyl-CoA dehydrogenase, N-terminal domaincontaining protein2e-13At3g51840ACX4 (ACYL-COA OXIDASE 4)O.I.H.G.S.X.
0.138.20.89Os03g0125600CB636799-Ser Thr specific protein kinase-like protein7e-29At1g01540protein kinase family proteinO.I.H.G.S.X.
0.127.20.90Os01g0904700AK062250.1-Two-component response regulator ARR1. Spliceisoform 22e-8At1g67710ARR11 (RESPONSE REGULATOR 11)O.I.H.G.S.X.
0.127.20.92Os01g0796400AK060287.1--2e-11At3g152903-hydroxybutyryl-CoA dehydrogenase, putativeO.I.H.G.S.X.
0.127.20.86Os10g0501500AK058495.1-Protein of unknown function DUF607 family protein1e-8At2g23790unknown proteinO.I.H.G.S.X.
0.105.70.92Os01g0775200NM_191457.1-Protein of unknown function DUF593 family protein3e-7At1g08800unknown proteinO.I.H.G.S.X.
0.094.90.91Os12g0157200AK064843.1-TLDc domain containing protein2e-1At4g34070calcium ion bindingO.I.H.G.S.X.
0.073.70.90Os06g0663200AK100479.1-Protein kinase APK1A (EC 2.7.1.-)3e-10At3g28690protein kinase, putativeO.I.H.G.S.X.
0.063.00.93Os10g0569300AK072459.1-Putative methyltransferase DUF248 family protein3e-10At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.052.50.93Os01g0355500AK119920.1-TolA family protein2e-37At4g12780heat shock protein bindingO.I.H.G.S.X.
0.052.50.92Os02g0193800AK108424.1-ARM repeat fold domain containing protein6e-1At2g05117SCRL9 (SCR-Like 9)O.I.H.G.S.X.
0.042.00.92Os11g0572500AY323129.1--2e-17At5g22000RHF2A (RING-H2 GROUP F2A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.699.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.598.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.697.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0341GO:0015986The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.Link to AmiGO
0.0261GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0241GO:0000160A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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