Co-expression analysis

Gene ID Os01g0611000
Gene name
Homology with ArabidopsisSimilar to At1g10790: - (HF=3e+0)
Module size 9 genes
NF 0.44
%ile 55.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.88Os01g0611000AK072500.1-Protein of unknown function DUF642 family protein3e+0At1g10790-O.I.H.G.S.X.
0.6079.70.93Os04g0689500AK060983.1-Conserved hypothetical protein7e-1At5g60615-O.I.H.G.S.X.
0.4863.70.94Os05g0563600AK099313.1-Beta-Ig-H3/fasciclin domain containing protein6e-1At5g09310unknown proteinO.I.H.G.S.X.
0.4863.70.95Os05g0176100AK067850.1-Cellulose synthase-13e-82At4g32410CESA1 (CELLULOSE SYNTHASE 1)O.I.H.G.S.X.
0.4458.10.96Os05g0386800AK070472.1--2e-17At5g60920COB (COBRA)O.I.H.G.S.X.
0.4253.90.95Os03g0736300AK070408.1-Endo-1,4-beta-glucanase (EC 3.2.1.4)1e-9At4g24260ATGH9A3 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A3)O.I.H.G.S.X.
0.4051.10.95Os08g0321000AK068096.1-Beta-Ig-H3/fasciclin domain containing protein2e-1At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.3846.90.95Os07g0424400AK120236.1-Cellulose synthase-71e-51At2g21770CESA9 (CELLULOSE SYNTHASE A9)O.I.H.G.S.X.
0.1611.30.91Os05g0413200AB104732.1-Beta-tubulin4e-114At5g62690TUB2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.798.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1382GO:0030244The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.Link to AmiGO
0.1332GO:0007155The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.Link to AmiGO
0.0571GO:0007242A series of reactions within the cell that occur as a result of a single trigger reaction or compound.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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