Co-expression analysis

Gene ID Os01g0610100
Gene name
Homology with ArabidopsisSimilar to At2g25610: H+-transporting two-sector ATPase, C subunit family protein (HF=4e-23)
Module size 6 genes
NF 0.76
%ile 96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.98Os01g0610100AK059810.1-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC 3.6.3.14) (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinO.I.H.G.S.X.
0.8395.80.98Os05g0593100AK061855.1-Vacuolar ATP synthase subunit C (EC 3.6.3.14)(V-ATPase C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.7793.10.98Os01g0587000AK067605.1-Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.6787.20.98Os11g0169900U27098.1-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit)(Fragment)4e-63At1g75630AVA-P4O.I.H.G.S.X.
0.6181.20.98Os06g0662000AK071775.1-Vacuolar ATP synthase catalytic subunit A (EC3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pumpalpha subunit) (V-ATPase 69 kDa subunit)0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.5978.00.98Os12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.798.1GSM1952305d-seedGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.597.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.397.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1742GO:0006818The directed movement of hydrogen (H2 or H+), into, out of, within or between cells.Link to AmiGO
0.0631GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO
0.0561GO:0015986The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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