Co-expression analysis

Gene ID Os01g0609300
Gene name
Homology with ArabidopsisSimilar to At3g18590: plastocyanin-like domain-containing protein (HF=6e-1)
Module size 6 genes
NF 0.41
%ile 49.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.79Os01g0609300AF093586-PDR-like ABC transporter (PDR3 ABC transporter)6e-1At3g18590plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.5068.00.84Os04g0600200AB007452.1-Alternative oxidase 1c, mitochondrial precursor(EC 1.-.-.-)5e-8At3g22370AOX1A (ALTERNATIVE OXIDASE 1A)O.I.H.G.S.X.
0.5068.00.84Os05g0576600AK107732.1-Conserved hypothetical protein3e-2At2g37000TCP family transcription factor, putativeO.I.H.G.S.X.
0.4051.10.81Os01g0631800AK069421.1-Conserved hypothetical protein2e-2At5g62760nuclear protein ZAP-relatedO.I.H.G.S.X.
0.3134.50.82Os04g0578000AK064250.1-ACC synthase (EC 4.4.1.14)2e-2At5g65800ACS5 (ACC SYNTHASE 5)O.I.H.G.S.X.
0.1915.10.82Os02g0327500AK069802.1-Arabidopsis protein of unknown function DUF266family protein1e-2At1g68390unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.799.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1821GO:0007585The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.Link to AmiGO
0.0151GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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