Co-expression analysis

Gene ID Os01g0607100
Gene name
Homology with ArabidopsisSimilar to At2g36100: integral membrane family protein (HF=3e-1)
Module size 12 genes
NF 0.28
%ile 28.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.95Os01g06071009629.m04043--3e-1At2g36100integral membrane family proteinO.I.H.G.S.X.
0.4253.90.96Os03g06757009631.m04590-Conserved hypothetical protein9e-2At4g38860auxin-responsive protein, putativeO.I.H.G.S.X.
0.3846.90.96Os09g04623009637.m02532-Esterase/lipase/thioesterase domain containingprotein3e+0At5g1620050S ribosomal protein-relatedO.I.H.G.S.X.
0.3846.90.96Os01g0167100AK072599.1-Hypothetical protein6e-1At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.3338.80.96Os06g0115200NM_185430.1-WD40-like domain containing protein4e+0At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.2422.40.97Os04g0464600AK105634.1-Zn-finger, C2H2 type domain containing protein2e-1At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.2321.20.97Os01g0202800NM_188316.1-Major intrinsic protein9e-2At4g18910NIP1O.I.H.G.S.X.
0.2321.20.97Os07g01240009635.m00230-Conserved hypothetical protein2e-3At2g30560glycine-rich proteinO.I.H.G.S.X.
0.2219.40.96Os02g0592700AK108162.1-Conserved hypothetical protein3e+0At1g31335unknown proteinO.I.H.G.S.X.
0.2117.90.97Os06g0222800AK101914.1-Metallophosphoesterase domain containing protein5e+0At3g61180zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.116.50.96Os02g0665600AK066338.1--3e+0At3g49060protein kinase family protein / U-box domain-containing proteinO.I.H.G.S.X.
0.105.70.97Os01g0939200AK110814.1-Conserved hypothetical protein3e+0At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.099.4GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.098.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.598.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage