Co-expression analysis

Gene ID Os01g0605200
Gene name
Homology with ArabidopsisSimilar to At1g68730: zinc finger (DNL type) family protein (HF=1e-6)
Module size 18 genes
NF 0.23
%ile 21.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9097.10.92Os01g0605200NM_192680.1-DNL zinc finger domain containing protein1e-6At1g68730zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.3440.00.95Os10g0338500BI804131-Conserved hypothetical protein1e+1Atmg00070-O.I.H.G.S.X.
0.3134.50.94Os05g0137600AK099427.1--2e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.2831.10.96Os01g0613900AK119181.1-Protein of unknown function UPF0052 and CofDfamily protein1e-15At2g34090MEE18 (maternal effect embryo arrest 18)O.I.H.G.S.X.
0.2625.60.94Os04g0414300AK058617.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein7e-1At2g33180unknown proteinO.I.H.G.S.X.
0.2625.60.96Os02g0221300AK065896.1-Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)7e+0At5g10300MES5 (METHYL ESTERASE 5)O.I.H.G.S.X.
0.2524.10.96Os09g0383400AK103385.1-Helicase, C-terminal domain containing protein9e-5At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.2422.40.97Os07g0619700NM_189847.1-Hypothetical protein8e-1At3g30220unknown proteinO.I.H.G.S.X.
0.2321.20.95Os02g01269009630.m00248-Phosphatidate cytidylyltransferase family protein4e-17At2g45150phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.2219.40.95Os01g0680700AK120014.1-Conserved hypothetical protein8e-2At4g21720unknown proteinO.I.H.G.S.X.
0.2117.90.94Os08g0520100AK120052.1-Pseudouridine synthase domain containing protein3e-4At1g78910pseudouridine synthase family proteinO.I.H.G.S.X.
0.2117.90.96Os06g0283200AK073829.1-Zn-finger-like, PHD finger domain containingprotein1e+0At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.H.G.S.X.
0.2016.50.94Os01g0547200AK073447.1-Zn-finger-like, PHD finger domain containingprotein4e-5At1g52770phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
0.2016.50.96Os01g0912600AK063179.1-Conserved hypothetical protein1e-2At1g28560SRD2 (SHOOT REDIFFERENTIATION DEFECTIVE 2)O.I.H.G.S.X.
0.1611.30.95Os02g0637900AK110708.1-Conserved hypothetical protein2e-31At1g73350unknown proteinO.I.H.G.S.X.
0.138.20.94Os12g0294100AK111535.1-WD40-like domain containing protein1e-3At2g47790transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.116.50.95Os02g0202800AK102082.1-FAR1 domain containing protein8e-2At4g35040bZIP transcription factor family proteinO.I.H.G.S.X.
0.116.50.96Os03g08160009631.m05921-Conserved hypothetical protein9e-6At5g05230ubiquitin-protein ligaseO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.599.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.699.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.298.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.698.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0771GO:0008654The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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