Co-expression analysis

Gene ID Os01g0602400
Gene name
Homology with ArabidopsisSimilar to At3g14650: CYP72A11 (HF=6e-2)
Module size 6 genes
NF 0.27
%ile 27.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.78Os01g0602400AK107349.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)6e-2At3g14650CYP72A11O.I.H.G.S.X.
0.3134.50.83Os05g0530400AY344492.1-Heat shock factor protein 1 (HSF 1) (Heat shocktranscription factor 1) (HSTF 1)1e-9At5g03720AT-HSFA3O.I.H.G.S.X.
0.3134.50.85Os04g0632100AF403127.1--9e-8At4g21370S-locus protein kinase, putativeO.I.H.G.S.X.
0.2219.40.82Os01g0155500AK099840.1-Resistance protein candidate (Fragment)1e-1At5g54380THE1 (THESEUS1)O.I.H.G.S.X.
0.2117.90.84Os01g0728300AK073238.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)1e+0At3g14680CYP72A14O.I.H.G.S.X.
0.1712.60.81Os01g0558100AK111021.1-Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1)8e-3At5g19090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.699.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.899.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.098.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.398.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1821GO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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