Co-expression analysis

Gene ID Os01g0580200
Gene name
Homology with ArabidopsisSimilar to At3g52840: BGAL2 (beta-galactosidase 2) (HF=1e-10)
Module size 6 genes
NF 0.31
%ile 33.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.83Os01g0580200AK103045.1-Beta-galactosidase precursor (EC 3.2.1.23)(Lactase) (Acid beta- galactosidase)(Exo-(1-->4)-beta-D-galactanase)1e-10At3g52840BGAL2 (beta-galactosidase 2)O.I.H.G.S.X.
0.6787.20.81Os12g0628400AK061110.1-Fatty acid hydroxylase domain containing protein1e-8At4g20870FAH2 (FATTY ACID HYDROXYLASE 2)O.I.H.G.S.X.
0.3644.00.87Os12g0262000AK106352.1-Hypothetical protein4e-3At4g12500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2016.50.90Os07g0295400AK060569.1-Conserved hypothetical protein6e-5At1g24310unknown proteinO.I.H.G.S.X.
0.1915.10.87Os01g0174500AK070484.1-Prolyl 4-hydroxylase, alpha subunit domaincontaining protein2e+0At5g18900oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1510.30.87Os12g0197700CB629457-XS zinc finger domain containing protein1e+0At5g09710magnesium transporter CorA-like family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
42.499.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
27.499.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.096.6GSM255762wt collar chipGSE12097antiOsLIC collar chipLink to GEO
4.996.5GSM195221Ovary 1, biological rep 1GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.696.3GSM255763antiOsLIC collar chipGSE12097antiOsLIC collar chipLink to GEO
4.596.3GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.496.2GSM195222Ovary 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.496.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM409428Nipponbare_young panicle 2cm, biological rep4GSE16265SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChipLink to GEO
4.095.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0911GO:0019538The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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