Co-expression analysis

Gene ID Os01g0558800
Gene name
Homology with ArabidopsisSimilar to At5g19300: - (HF=8e-1)
Module size 6 genes
NF 0.76
%ile 96.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.95Os01g0558800AK068120.1-Conserved hypothetical protein8e-1At5g19300-O.I.H.G.S.X.
0.8094.60.94Os12g0562100AK064831.1-Conserved hypothetical protein1e+0At5g53110-O.I.H.G.S.X.
0.7391.10.95Os11g0153700AK058576.1-Signal recognition particle 54 kDa protein,chloroplast precursor (SRP54) (54 chloroplast protein)(54CP) (FFC)2e-35At5g03940CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)O.I.H.G.S.X.
0.6787.20.95Os01g0141600AK066922.1-Protein of unknown function DUF647 family protein7e-23At5g01510-O.I.H.G.S.X.
0.4458.10.95Os03g0211600AK059620.1-TPR-like domain containing protein2e-1At4g23720unknown proteinO.I.H.G.S.X.
0.4458.10.95Os01g0705300AK102719.1-Conserved hypothetical protein1e-1At1g60320Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.699.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.497.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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