Co-expression analysis

Gene ID Os01g0532800
Gene name
Homology with ArabidopsisSimilar to At5g47550: cysteine protease inhibitor, putative / cystatin, putative (HF=2e-2)
Module size 6 genes
NF 0.59
%ile 80.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os01g0532800AK060594.1--2e-2At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.7391.10.97Os02g0699700AK072471.1-DNA topoisomerase II1e-8At3g23890TOPII (TOPOISOMERASE II)O.I.H.G.S.X.
0.6787.20.97Os01g0904400AK103514.1-SMC2-11e-29At5g62410SMC2 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 2)O.I.H.G.S.X.
0.5573.70.97Os04g0599800AK103675.1-WD-repeat protein-like protein2e-14At4g33260CDC20.2O.I.H.G.S.X.
0.3644.00.98Os07g0105700AK063949.1-Carboxy-terminal kinesin 2 (XCTK2)9e-8At4g05190ATK5 (ARABIDOPSIS THALIANA KINESIN 5)O.I.H.G.S.X.
0.3338.80.97Os03g0288900AK100329.1-Hypothetical protein3e-1At1g05300ZIP5O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.197.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2861GO:0000278Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent.Link to AmiGO
0.2861GO:0007059The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.Link to AmiGO
0.2221GO:0007067A cell cycle process comprising the steps by which the nucleus of a eukaryotic cell divides; the process involves condensation of chromosomal DNA into a highly compacted form. Canonically, mitosis produces two daughter nuclei whose chromosome complement is identical to that of the mother cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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