Co-expression analysis

Gene ID Os01g0531400
Gene name
Homology with ArabidopsisSimilar to At2g34510: - (HF=3e-16)
Module size 6 genes
NF 0.61
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.94Os01g0531400AK102373.1-Protein of unknown function DUF642 family protein3e-16At2g34510-O.I.H.G.S.X.
0.7391.10.94Os09g0363900AK072899.1-Mandelonitrile lyase-like protein1e-3At1g72970HTH (HOTHEAD)O.I.H.G.S.X.
0.6787.20.94Os01g0756600AK102373.1-Protein of unknown function DUF642 family protein3e-16At2g34510-O.I.H.G.S.X.
0.6787.20.94Os04g0649200AK103112.1-Plant protein of unknown function DUF869 familyprotein4e-4At2g23360transport protein-relatedO.I.H.G.S.X.
0.5371.30.94Os04g0517000AK101663.1-Conserved hypothetical protein3e-2At1g11700unknown proteinO.I.H.G.S.X.
0.3032.70.94Os05g0406800AK062566.1-Leucine-rich repeat, plant specific containingprotein2e-2At3g53235unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8094.60.90Os11g0221000AK102073.1-Hypothetical protein4e-4At3g23050IAA7 (INDOLE-3-ACETIC ACID 7)O.I.H.G.S.X.
0.6181.20.93Os07g0205500AK103449.1-Protein of unknown function DUF239 domaincontaining protein8e-23At3g13510unknown proteinO.I.H.G.S.X.
0.5978.00.92Os06g0478600AK064086.1-Leucine-rich repeat, plant specific containingprotein9e-1At5g01380transcription factorO.I.H.G.S.X.
0.5777.00.93Os01g0326000AK061371.1-Peroxidase 12e-1At1g44970peroxidase, putativeO.I.H.G.S.X.
0.5068.00.90Os01g0201600AK058956.1-Conserved hypothetical protein3e+0At1g60620ATRPAC43O.I.H.G.S.X.
0.5068.00.91Os03g0239000AK061284.1-Glycoside hydrolase, family 16 domain containingprotein2e-4At1g32170XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4)O.I.H.G.S.X.
0.5068.00.96Os01g0957100AK122121.1-Protein kinase domain containing protein2e+0At3g45230hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4660.90.88Os03g0167000AK107307.1-Hypothetical protein2e+0At2g02230AtPP2-B1 (Phloem protein 2-B1)O.I.H.G.S.X.
0.4253.90.92Os06g0133600AK105690.1-Phosphate-induced protein 1 conserved regionfamily protein7e-1At3g20890RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4152.40.87Os07g0194300AK062637.1-Hypothetical protein1e+0At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.3846.90.88Os11g0150400AK058243.1-Conserved hypothetical protein4e-1At5g55570unknown proteinO.I.H.G.S.X.
0.3644.00.89Os09g0463300AK060628.1-Protein of unknown function DUF547 domaincontaining protein3e-7At4g37080unknown proteinO.I.H.G.S.X.
0.3338.80.87Os05g01887009633.m00876-Conserved hypothetical protein6e-1At4g18570proline-rich family proteinO.I.H.G.S.X.
0.3236.30.90Os01g0110800AK065190.1-Leucine-rich repeat, plant specific containingprotein1e+0At5g58590RANBP1 (RAN BINDING PROTEIN 1)O.I.H.G.S.X.
0.3236.30.92Os03g0311600AK103709.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein4e-2At2g30560glycine-rich proteinO.I.H.G.S.X.
0.3032.70.88Os01g0652000NM_192389.1--1e-3At4g18570proline-rich family proteinO.I.H.G.S.X.
0.3032.70.90Os07g0134200AF193835.1-Receptor-like protein kinase 32e-22At5g65700BAM1 (BARELY ANY MERISTEM 1)O.I.H.G.S.X.
0.2931.10.85Os03g0683800AK099266.1-Proline-rich protein APG-like2e-1At2g41225unknown proteinO.I.H.G.S.X.
0.2931.10.90Os05g0419800AK100958.1-Lipolytic enzyme, G-D-S-L family protein2e-4At5g08460GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.2931.10.91Os01g0876800BI804947-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e+0At5g28770BZO2H3O.I.H.G.S.X.
0.2931.10.93Os03g0637800AK101339.1-Protein kinase family protein4e-17At3g59420ACR4 (ARABIDOPSIS CRINKLY4)O.I.H.G.S.X.
0.2727.50.88Os01g0251400AU082531-Hypothetical protein1e-1At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)O.I.H.G.S.X.
0.2727.50.87Os01g0863500AK111023.1-Conserved hypothetical protein2e+0At2g1974060S ribosomal protein L31 (RPL31A)O.I.H.G.S.X.
0.2625.60.89Os08g0562500AK063515.1-Transferase family protein1e+0At5g23940EMB3009 (embryo defective 3009)O.I.H.G.S.X.
0.2524.10.86Os03g0844600AK108050.1-Lipolytic enzyme, G-D-S-L family protein5e-7At3g26020serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeO.I.H.G.S.X.
0.2524.10.87Os04g0507700AK121383.1-Lipolytic enzyme, G-D-S-L family protein6e-5At5g33370GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.999.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.298.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.098.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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