Co-expression analysis

Gene ID Os01g0502600
Gene name
Homology with ArabidopsisSimilar to At2g34070: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.33
%ile 35.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.99Os01g05026009629.m02960--2e+0At2g34070unknown proteinO.I.H.G.S.X.
0.6787.20.99Os08g0518600AK071227.1-Hypothetical protein2e-1At4g18195PUP8 (ARABIDOPSIS THALIANA PURINE PERMEASE 8)O.I.H.G.S.X.
0.5068.01.00Os05g0283600AK106958.1-The start codon is not identified.6e+0At5g49015Expressed proteinO.I.H.G.S.X.
0.4355.40.99Os05g02732019633.m01723--4e+0At2g46150-O.I.H.G.S.X.
0.2625.60.99Os11g0220300AK068820.1-Hypothetical protein4e-3At2g20560DNAJ heat shock family proteinO.I.H.G.S.X.
0.116.50.99Os02g0617025NM_183609.1--3e-1At3g30725AtGDU6 (Arabidopsis thaliana GLUTAMINE DUMPER 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.999.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.798.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.698.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.698.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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