Co-expression analysis

Gene ID Os01g0496300
Gene name
Homology with ArabidopsisSimilar to At3g43430: zinc finger (C3HC4-type RING finger) family protein (HF=9e+0)
Module size 6 genes
NF 0.56
%ile 75.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os01g04963009629.m02894--9e+0At3g43430zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5573.70.99Os10g04312009638.m02528--4e+0At1g68680unknown proteinO.I.H.G.S.X.
0.5068.00.99Os11g01542009639.m00474--5e-5At1g54200unknown proteinO.I.H.G.S.X.
0.4762.30.99Os01g0195700NM_188237.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein2e+0At3g02860zinc ion bindingO.I.H.G.S.X.
0.4458.10.99Os09g0524500AK119967.1-Hypothetical protein3e+0At1g63245CLE14 (CLAVATA3/ESR-RELATED 14)O.I.H.G.S.X.
0.3644.00.99Os10g0345500NM_195897.1--1e+0At5g14740CA2 (CARBONIC ANHYDRASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.999.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.099.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.098.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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