Co-expression analysis

Gene ID Os01g0359600
Gene name
Homology with ArabidopsisSimilar to At1g73500: MKK9 (MAP KINASE KINASE 9) (HF=1e-1)
Module size 6 genes
NF 0.22
%ile 20.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.85Os01g0359600NM_194003.1--1e-1At1g73500MKK9 (MAP KINASE KINASE 9)O.I.H.G.S.X.
0.5068.00.83Os01g0947700AK066757.1-Beta-1,3-glucanase4e-1At5g66780unknown proteinO.I.H.G.S.X.
0.5068.00.85Os11g0223400AK112108.1-Hypothetical protein3e+0At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.2219.40.84Os07g0608900AK068639.1-Peroxisome assembly protein 10 (Peroxin-10)(AthPEX10) (Pex10p) (PER8)3e+0At5g49400zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.1915.10.85Os08g0534900AK101573.1-ARM repeat fold domain containing protein9e-1At3g46150unknown proteinO.I.H.G.S.X.
0.063.00.84Os11g0550100AK103015.1-Disease resistance protein family protein4e-3At3g58530F-box family protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.598.9GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
11.498.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.497.9GSM100445Rice Bala 1ppm Arsenate Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
8.597.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM149410Rice Azucena 1ppm Arsenate Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
8.097.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage