Co-expression analysis

Gene ID Os01g0357400
Gene name
Homology with ArabidopsisSimilar to At5g53190: nodulin MtN3 family protein (HF=7e-1)
Module size 7 genes
NF 0.47
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.99Os01g0357400AK063489.1-Glycoside hydrolase family 13 protein7e-1At5g53190nodulin MtN3 family proteinO.I.H.G.S.X.
0.6181.20.99Os04g06428019632.m05346--3e+0At1g08920sugar transporter, putativeO.I.H.G.S.X.
0.6079.70.99Os01g06632009629.m04543--6e-1At1g62240unknown proteinO.I.H.G.S.X.
0.6079.70.99Os04g02458009632.m01551--3e-1At1g30850unknown proteinO.I.H.G.S.X.
0.3846.90.99Os11g02756009636.m01390--6e-1At2g40170GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)O.I.H.G.S.X.
0.3236.30.99Os04g05127509632.m04151--3e+0At1g43700VIP1 (VIRE2-INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.2524.10.99Os07g0664100NM_186063.1-Glucose/ribitol dehydrogenase family protein1e+0At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.899.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.299.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.599.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.798.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.298.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.398.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage