Co-expression analysis

Gene ID Os01g0346700
Gene name
Homology with ArabidopsisSimilar to At1g75550: glycine-rich protein (HF=5e-4)
Module size 7 genes
NF 0.59
%ile 80.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.93Os01g0346700AK071793.1-Conserved hypothetical protein5e-4At1g75550glycine-rich proteinO.I.H.G.S.X.
0.8395.80.93Os09g0456200AK065873.1-BZIP transcription factor ABI52e-7At4g34000ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)O.I.H.G.S.X.
0.5573.70.94Os09g0497600AK100566.1-Cyclin-like F-box domain containing protein3e-1At3g57150NAP57 (Arabidopsis thaliana homologue of NAP57)O.I.H.G.S.X.
0.4863.70.93Os08g0457600AK065020.1-RSH28e-24At3g14050RSH2 (RELA-SPOT HOMOLOG 2)O.I.H.G.S.X.
0.4660.90.95Os06g0213400AK071478.1-Eukaryotic protein of unknown function DUF829family protein9e-1At2g15695unknown proteinO.I.H.G.S.X.
0.4051.10.96Os09g0516600AK103563.1-Glyoxalase II2e-7At1g06130GLX2-4 (glyoxalase 2-4)O.I.H.G.S.X.
0.3846.90.95Os02g0771100AB040053.1-COP1 regulatory protein (Constitutivephotomorphogenesis protein 1)3e-29At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.399.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.698.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.897.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
7.897.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1671GO:0015969The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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