Co-expression analysis

Gene ID Os01g0338600
Gene name
Homology with ArabidopsisSimilar to At2g43945: unknown protein (HF=6e-29)
Module size 6 genes
NF 0.70
%ile 92.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.94Os01g0338600AK066580.1-Conserved hypothetical protein6e-29At2g43945unknown proteinO.I.H.G.S.X.
0.7189.60.94Os01g0749400AK067731.1-Glycosyl transferase, family 20 domain containingprotein2e-12At1g06410ATTPS7O.I.H.G.S.X.
0.6787.20.94Os12g0283900AK106931.1-Protein prenyltransferase domain containingprotein2e-11At3g46610pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.5573.70.95Os04g0235600CR291556-ATP synthase B chain (EC 3.6.3.14) (Subunit I)2e-42Atcg00130-O.I.H.G.S.X.
0.5068.00.98Os01g0792400AK062797.1-Photosystem I assembly protein ycf42e-53Atcg00520-O.I.H.G.S.X.
0.4051.10.94Os11g0642800AK068792.1-Glutathione synthetase5e-9At5g27380GSH2 (GLUTATHIONE SYNTHETASE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
46.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.199.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.898.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.597.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2001GO:0006750The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins.Link to AmiGO
0.1051GO:0005992The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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