CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0327500

Gene name
Homology with Arabidopsis Similar to At5g66170: - (HF=1e+0)

Module size 8 genes

NF 0.15

%ile 13.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.93 99.2 0.82 Os01g0327500 AK107756.1 - Conserved hypothetical protein 1e+0 At5g66170 - O.I. H.G. S.X.
0.31 34.5 0.92 Os03g0138500 AK102410.1 - Hypothetical protein 5e-2 At3g10040 transcription factor O.I. H.G. S.X.
0.29 31.1 0.90 Os06g0115700 AK073098.1 - Conserved hypothetical protein 1e-1 At1g12760 protein binding / ubiquitin-protein ligase/ zinc ion binding O.I. H.G. S.X.
0.27 27.5 0.91 Os03g0727000 AK107637.1 - Homeobox 20 8e-16 At4g08150 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) O.I. H.G. S.X.
0.15 10.3 0.88 Os10g0146200 AK109913.1 - Thaumatin-like protein 1e-5 At1g20030 pathogenesis-related thaumatin family protein O.I. H.G. S.X.
0.09 4.9 0.92 Os11g0484300 AK121422.1 - MCM protein 2 family protein 5e-87 At1g44900 ATP binding / DNA binding / DNA-dependent ATPase O.I. H.G. S.X.
0.09 4.9 0.92 Os11g0657000 AK103782.1 - Galactose oxidase, central domain containingprotein 3e-5 At5g18590 kelch repeat-containing protein O.I. H.G. S.X.
0.08 4.2 0.91 Os01g0779800 AK119965.1 - Hypothetical protein 4e-2 At4g28180 unknown protein O.I. H.G. S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.6 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.5 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.3 98.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.0 98.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.2 98.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.9 98.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.9 98.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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