Co-expression analysis

Gene ID Os01g0279900
Gene name
Homology with ArabidopsisSimilar to At3g12250: TGA6 (TGACG MOTIF-BINDING FACTOR 6) (HF=6e-11)
Module size 9 genes
NF 0.53
%ile 70.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.40.97Os01g0279900AB051296.1-Basic-leucine zipper (bZIP) transcription factordomain containing protein6e-11At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.6382.70.97Os04g0609700AK101763.1-The start codon is not identified.3e-17At1g79350EMB1135 (embryo defective 1135)O.I.H.G.S.X.
0.5269.60.97Os12g0110000AY491431.1-Regulatory associated protein of TOR familyprotein3e-52At3g08850RAPTOR1O.I.H.G.S.X.
0.5068.00.97Os11g0544200AK120528.1-Conserved hypothetical protein4e-1At5g15690-O.I.H.G.S.X.
0.4762.30.97Os08g0374200CR278593-Conserved hypothetical protein2e+0At5g44130FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)O.I.H.G.S.X.
0.4660.90.97Os01g0367300AK101567.1-Conserved hypothetical protein2e+0At2g19040RALFL12 (RALF-LIKE 12)O.I.H.G.S.X.
0.4355.40.97Os11g0473200AK106730.1-Ubiquitin carboxyl-terminal hydrolase 12 (EC3.1.2.15) (Ubiquitin thiolesterase 12)(Ubiquitin-specific processing protease 12)(Deubiquitinating enzyme 12)2e-5At2g40930UBP5 (UBIQUITIN-SPECIFIC PROTEASE 5)O.I.H.G.S.X.
0.4253.90.97Os08g0178300AK068383.1-Conserved hypothetical protein8e-11At1g31870unknown proteinO.I.H.G.S.X.
0.4253.90.97Os05g0593300AK106591.1-Conserved hypothetical protein6e-9At3g24870DNA bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.199.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.798.0GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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