Co-expression analysis

Gene ID Os01g0253300
Gene name
Homology with ArabidopsisSimilar to At3g06720: IMPA-1 (IMPORTIN ALPHA ISOFORM 1) (HF=6e-24)
Module size 6 genes
NF 0.31
%ile 33.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.96Os01g0253300AB004660.1-Importin alpha 26e-24At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.4051.10.96Os02g0610600AK099572.1-9G8-like SR protein (RSZp22 splicing factor)9e-9At2g24590splicing factor, putativeO.I.H.G.S.X.
0.3644.00.96Os11g0102600AF280060.1-Lissencephaly type-1-like homology motif domaincontaining protein5e-14At3g55000TON1A (TONNEAU 1)O.I.H.G.S.X.
0.2117.90.96Os04g0504800AK064269.1-Poly(A)-binding protein4e-13At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)O.I.H.G.S.X.
0.1915.10.96Os04g0449900AK069926.1-RNA Binding Protein 473e-3At1g49600ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)O.I.H.G.S.X.
0.1712.60.97Os02g0122000AK121653.1-P184e-1At1g18170immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
58.699.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
41.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.397.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.196.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.895.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.795.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
3.495.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.495.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.395.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0006606The directed movement of a protein from the cytoplasm to the nucleus.Link to AmiGO
0.0201GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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