Co-expression analysis

Gene ID Os01g0248900
Gene name
Homology with ArabidopsisSimilar to At2g37640: EXP3 (HF=5e-10)
Module size 15 genes
NF 0.55
%ile 73.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.87Os01g0248900AK111100.1-Expansin EXPA55e-10At2g37640EXP3O.I.H.G.S.X.
0.6987.90.90Os05g0276500U30479.1-Expansin Os-EXPA35e-1At2g39700ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4)O.I.H.G.S.X.
0.6382.70.89Os04g0684300AK105205.1-Hypothetical protein2e+1Atcg00560-O.I.H.G.S.X.
0.6382.70.91Os08g0477500AU033142-S.tuberosum patatin (Fragment)2e+0At1g28280VQ motif-containing proteinO.I.H.G.S.X.
0.5877.00.88Os10g0555700U95968.1-Major pollen allergen Lol pI family protein3e+0At2g44310calcium-binding EF hand family proteinO.I.H.G.S.X.
0.5877.00.90Os04g0423800AK108989.1-Peroxidase precursor (EC 1.11.1.7)3e-3At1g44970peroxidase, putativeO.I.H.G.S.X.
0.5877.00.90Os07g0630400AK060320.1-Ribonuclease T2 family protein2e+0At3g22580protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5676.30.91Os03g0245500AK064707.1-Curculin-like (mannose-binding) lectin domaincontaining protein1e+1At5g53560CB5-E (CYTOCHROME B5 ISOFORM E)O.I.H.G.S.X.
0.5068.00.89Os02g0512000AK108786.1-Auxin responsive SAUR protein family protein2e-1At5g33390glycine-rich proteinO.I.H.G.S.X.
0.5068.00.89Os07g01930009635.m00915-HIPL1 protein precursor3e-1At5g62630HIPL2 (HIPL2 PROTEIN PRECURSOR)O.I.H.G.S.X.
0.4964.40.90Os03g0103100AY466108.1-Physical impedance induced protein2e+0At3g51510unknown proteinO.I.H.G.S.X.
0.4660.90.87Os03g0368900AK120411.1-Haem peroxidase, plant/fungal/bacterial familyprotein1e-2At5g64120peroxidase, putativeO.I.H.G.S.X.
0.4558.80.88Os10g0323500AK071372.1-Beta-glucosidase1e-6At1g26560BGLU40 (BETA GLUCOSIDASE 40)O.I.H.G.S.X.
0.4458.10.90Os07g0421300AK121014.1-Glycoside hydrolase, family 31 protein7e-15At3g23640HGL1 (heteroglycan glucosidase 1)O.I.H.G.S.X.
0.4152.40.89Os01g0652300AK063136.1-Hypothetical protein5e+0At1g30475-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.899.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
27.699.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0391GO:0009734The series of molecular signals generated in response to detection of auxin.Link to AmiGO
0.0391GO:0050896A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.Link to AmiGO
0.0392GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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