Co-expression analysis

Gene ID Os01g0227500
Gene name
Homology with ArabidopsisSimilar to At4g33960: unknown protein (HF=2e-1)
Module size 12 genes
NF 0.27
%ile 27.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7088.40.87Os01g0227500AK120914.1-Cytochrome P450 family protein2e-1At4g33960unknown proteinO.I.H.G.S.X.
0.4051.10.89Os02g0206100AK066593.1-The start codon is not identified.4e+0At3g60550CYCP3O.I.H.G.S.X.
0.4051.10.90Os07g0180300AK065026.1-Protein of unknown function DUF594 family protein3e-1At4g19080unknown proteinO.I.H.G.S.X.
0.3644.00.92Os02g0564400BI812922-ATP-dependent Clp protease ATP-binding subunitClpX-like, mitochondrial precursor2e-42At5g53350CLPXO.I.H.G.S.X.
0.3236.30.91Os03g0169600AK099490.1-Zn-finger, Dof type domain containing protein2e-17At5g39660CDF2 (CYCLING DOF FACTOR 2)O.I.H.G.S.X.
0.3032.70.90Os05g0520600AK067487.1-Conserved hypothetical protein1e-2At4g32860unknown proteinO.I.H.G.S.X.
0.2321.20.92Os06g0146400AK070964.1--3e-2At1g10500ATCPISCA (chloroplast-localized IscA-like protein)O.I.H.G.S.X.
0.2321.20.92Os02g0805500AK065057.1-PAP-specific phosphatase HAL2-like(3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7)(3'(2'),5-bisphosphonucleoside 3'(2')- phosphohydrolase)(DPNPase) (Halotolerance protein)2e-8At5g54390AHL (ARABIDOPSIS HAL2-LIKE)O.I.H.G.S.X.
0.2117.90.92Os02g0726600AK064213.1-Conserved hypothetical protein5e+0At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.1813.70.88Os11g02090009639.m00974-Glycine rich family protein4e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.1712.60.92Os04g0321800AK069106.1-Protein phosphatase 2C-like domain containingprotein1e-15At5g36250protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.138.20.91Os04g0423600AK065331.1-Nuclear protein SET domain containing protein8e+0At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.098.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.497.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0006790The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.Link to AmiGO
0.0671GO:0009401The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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