Co-expression analysis

Gene ID Os01g0224100
Gene name
Homology with ArabidopsisSimilar to At4g17490: ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6) (HF=4e-3)
Module size 19 genes
NF 0.21
%ile 19.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.10.91Os01g0224100AK106517.1-Ethylene-responsive element binding factor4e-3At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)O.I.H.G.S.X.
0.3644.00.96Os07g0662700AK106855.1-TPR-like domain containing protein6e-5At2g01510pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3541.70.93Os03g0566600AK063379.1-Methyltransferase FkbM domain containing protein2e+0At2g26680-O.I.H.G.S.X.
0.3236.30.95Os10g0327300AK106742.1-Phosphatidate cytidylyltransferase family protein4e-15At4g26770phosphatidate cytidylyltransferase/ transferase, transferring phosphorus-containing groupsO.I.H.G.S.X.
0.3236.30.95Os02g01425009630.m00414-Conserved hypothetical protein1e-7At1g33410SAR1 (suppressor of auxin resistance1)O.I.H.G.S.X.
0.2422.40.93Os04g0376600AK106516.1-Conserved hypothetical protein8e-1At5g10590unknown proteinO.I.H.G.S.X.
0.2321.20.93Os04g0605200AK108075.1-Conserved hypothetical protein6e-3At5g10700aminoacyl-tRNA hydrolase/ protein tyrosine phosphataseO.I.H.G.S.X.
0.2016.50.96Os06g0304500AK119441.1-Protein of unknown function UPF0044 family protein1e-13At4g13070group II intron splicing factor CRS1-relatedO.I.H.G.S.X.
0.2016.50.95Os08g0116800AK063695.1-3' exoribonuclease domain containing protein2e-9At4g274903' exoribonuclease family domain 1-containing proteinO.I.H.G.S.X.
0.2016.50.95Os01g0736400AK069723.1-Aminotransferase, class I and II domain containingprotein7e-6At5g04620ATBIOF (BIOTIN F)O.I.H.G.S.X.
0.1813.70.97Os09g01102009637.m00069-Protein prenyltransferase domain containingprotein8e-2At1g29710pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.1712.60.96Os12g0118700AK073862.1-Zn-finger, RING domain containing protein8e-8At5g08139zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1712.60.96Os07g0667400AK073297.1-SAM (and some other nucleotide) binding motifdomain containing protein1e-2At3g45240GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1)O.I.H.G.S.X.
0.1611.30.95Os01g0649000AK073564.1-WD40-like domain containing protein1e+0At3g56380ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17)O.I.H.G.S.X.
0.1611.30.93Os03g0204100AK121042.1-Actin-binding FH2 domain containing protein3e-11At3g25500AFH1 (FORMIN HOMOLOGY 1)O.I.H.G.S.X.
0.149.30.95Os04g0483400AK063531.1-Conserved hypothetical protein1e-3At1g51440lipase class 3 family proteinO.I.H.G.S.X.
0.138.20.96Os07g0530100AK069279.1-Tyrosyl-DNA phosphodiesterase family protein9e-14At5g15170tyrosyl-DNA phosphodiesterase-relatedO.I.H.G.S.X.
0.127.20.95Os04g0610200AK120522.1-Conserved hypothetical protein4e-1At4g29940PRHA (PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A)O.I.H.G.S.X.
0.084.20.94Os10g0135400AK069878.1-Cyclin-like F-box domain containing protein3e+0At5g02920ubiquitin-protein ligaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0741GO:0008654The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.Link to AmiGO
0.0491GO:0007186The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.Link to AmiGO
0.0131GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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