Co-expression analysis

Gene ID Os01g0216000
Gene name
Homology with ArabidopsisSimilar to At4g09840: unknown protein (HF=8e-4)
Module size 6 genes
NF 0.24
%ile 22.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.66Os01g0216000AK058429.1-Lipolytic enzyme, G-D-S-L family protein8e-4At4g09840unknown proteinO.I.H.G.S.X.
0.2931.10.78Os11g01797009639.m00715-Plant disease resistance response protein familyprotein2e-2At1g22900-O.I.H.G.S.X.
0.2831.10.70Os02g0582900AK109082.1-Conotoxin family protein3e-2At5g55210unknown proteinO.I.H.G.S.X.
0.2219.40.77Os08g0239300AK059753.1-Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-)6e-1At4g17310unknown proteinO.I.H.G.S.X.
0.127.20.77Os06g0521500AK072761.1-Haem peroxidase, plant/fungal/bacterial familyprotein7e-4At3g50990electron carrier/ heme binding / peroxidaseO.I.H.G.S.X.
0.116.50.71Os12g0260500AU184051-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g56860GNC (GATA, nitrate-inducible, carbon metabolism-involved)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
65.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.799.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.998.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.398.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.898.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0221GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1621077_s_at, orthologous to the query gene, Os01g0216000

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5779.81621077_s_atAt4g09840hypothetical protein LOC100256381-2e-17At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.H.G.S.X.
0.5779.81613581_atAt4g09840hypothetical protein LOC100262899-1e-17At3g17800-O.I.H.G.S.X.
0.4361.51614445_atAt4g09840hypothetical protein LOC100250076-3e-36At1g63970ISPFO.I.H.G.S.X.
0.4057.71611652_s_atAt4g09840hypothetical protein LOC100264196-2e-53At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)O.I.H.G.S.X.
0.3243.11621483_atAt4g09840hypothetical protein LOC100254964-2e-6At1g12810proline-rich family proteinO.I.H.G.S.X.
0.2937.71608138_s_atAt4g09840--0Atcg00120-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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