Co-expression analysis

Gene ID Os01g0197700
Gene name
Homology with ArabidopsisSimilar to At3g63440: CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) (HF=1e+0)
Module size 6 genes
NF 0.00
%ile 0.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.55Os01g0197700CB620528-Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1)1e+0At3g63440CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6)O.I.H.G.S.X.
-0.10.62Os11g0145200AK107669.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein2e-1At2g23250UGT84B2 (UDP-glucosyl transferase 84B2)O.I.H.G.S.X.
-0.10.33Os01g0952500AK101721.1-Two-component response regulator ARR9 (Responsereactor 4)9e-7At3g57040ARR9 (RESPONSE REGULATOR 9)O.I.H.G.S.X.
-0.10.63Os01g0187600AK109624.1-Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1)2e-1At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
-0.10.68Os03g02937009631.m01795--3e-1At5g66800unknown proteinO.I.H.G.S.X.
-0.10.78Os05g0100500AK071466.1-Paired amphipathic helix protein Sin3a3e+0At5g65570pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.898.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.898.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.798.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM154938Root_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
9.097.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM154937Root_tZ-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1431GO:0009735A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.Link to AmiGO
0.0331GO:0000160A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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