Co-expression analysis

Gene ID Os01g0186500
Gene name
Homology with ArabidopsisSimilar to At2g29050: ATRBL1 (Arabidopsis thaliana Rhomboid-like 1) (HF=9e-2)
Module size 19 genes
NF 0.25
%ile 24.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.97Os01g01865009629.m00858--9e-2At2g29050ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)O.I.H.G.S.X.
0.4355.40.98Os11g0623700AK063799.1-Conserved hypothetical protein2e+0At3g48100ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5)O.I.H.G.S.X.
0.3440.00.98Os04g03609009632.m02753--7e-3At5g05230ubiquitin-protein ligaseO.I.H.G.S.X.
0.3236.30.99Os06g0202600AK064228.1-Conserved hypothetical protein5e-2At5g66300NAC105 (NAC DOMAIN CONTAINING PROTEIN 105)O.I.H.G.S.X.
0.3032.70.99Os08g0389500AK111829.1-Viral coat and capsid protein family protein2e+0At5g54660heat shock protein-relatedO.I.H.G.S.X.
0.2727.50.99Os12g05826339636.m04002--6e-1At3g46666unknown proteinO.I.H.G.S.X.
0.2422.40.99Os01g03569509629.m02471--1e+0At4g35060heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.H.G.S.X.
0.2321.20.98Os07g0190700AK111434.1--6e-2At3g47960proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.2219.40.97Os04g0480700AK063679.1-Cytochrome P450 71A1 (EC 1.14.-.-) (CYPLXXIA1)(ARP-2)4e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.2117.90.98Os01g08822009629.m06542--3e+0At4g32080unknown proteinO.I.H.G.S.X.
0.2016.50.99Os03g0654900AK066712.1-Conserved hypothetical protein6e-1At5g07450CYCP4O.I.H.G.S.X.
0.1915.10.98Os04g01311009632.m00321--7e-2At5g08055-O.I.H.G.S.X.
0.1915.10.99Os04g0531600AK107678.1-Conserved hypothetical protein1e-3At2g37710RLK (receptor lectin kinase)O.I.H.G.S.X.
0.1915.10.99Os10g03233009638.m01455--2e-1At3g18570glycine-rich protein / oleosinO.I.H.G.S.X.
0.1813.70.98Os08g0163800AK107012.1-Protein of unknown function DUF260 domaincontaining protein5e-2At5g44450methyltransferaseO.I.H.G.S.X.
0.1712.60.99Os06g0165600AY345235.1-CRT/DRE binding factor (Transcription factorRCBF4)2e-3At5g65320basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.1611.30.99Os06g06055009634.m03868--2e+0At3g08690UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)O.I.H.G.S.X.
0.149.30.99Os11g04422009639.m02271--4e-1At3g54290-O.I.H.G.S.X.
0.138.20.99Os05g04939009633.m03962--4e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.799.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.799.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.599.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
17.198.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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